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geneatlas personal microarray system  (Thermo Fisher)


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    Thermo Fisher geneatlas personal microarray system
    Geneatlas Personal Microarray System, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/geneatlas+personal+microarray+system/pmc06620573-301-43-42
    Average 86 stars, based on 1 article reviews
    geneatlas personal microarray system - by Bioz Stars, 2026-09
    86/100 stars

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    Related Articles

    other:

    Article Title: CAF-like state in primary skin fibroblasts with constitutional BRCA1 epimutation sheds new light on tumor suppressor deficiency-related changes in healthy tissue
    Article Snippet: Gene expression microarray analysis The array experiment was performed by Affymetrix using the GeneAtlasTM Personal Microarray System (Affymetrix).

    Article Title: Low Neonatal Plasma n-6/n-3 PUFA Ratios Regulate Offspring Adipogenic Potential and Condition Adult Obesity Resistance
    Article Snippet: Raw data were GC-RMA (robust multiarray averaging) normalized, log2 transformed, and analyzed by using the Partek Genomic Suite as previously described ( 27 ).

    Article Title: Environmental stimuli shape microglial plasticity in glioma
    Article Snippet: Microarray experiments were performed with 100 ng of total RNA and HT-MG-430 PM Affymetrix strip according to the manufacturer’s User Guide for the GeneAtlas Per- sonal Microarray System (Affymetrix, Santa Clara, CA, USA) .

    Microarray:

    Article Title: Endogenous intrahepatic IFNs and association with IFN-free HCV treatment outcome
    Article Snippet: Total RNA was extracted with the TissueRuptor and RNeasy kit (Qiagen), with an on-column elimination of residual DNA by DNAseI digestion (Qiagen). .. Microarray expression analysis was performed using 50–100 ng total RNA that was amplified, biotinylated, and hybridized to the Affymetrix Human Genome U-219 array, composed of over 530,000 probes representing more than 36,000 transcripts, using a GeneAtlas Personal Microarray System (Affymetrix). ..

    Article Title: Liver X receptor-α activation enhances cholesterol secretion in lactating mammary epithelium
    Article Snippet: .. Briefly, 250 ng of total RNA were used as input to the Whole-Transcript Expression RNA kit (Life Technologies, Carlsbad, CA), samples were hybridized to mouse 1.1 ST Gene Arrays (Affymetrix, Santa Clara, CA), and arrays were washed, stained, and imaged using the Affymetrix GeneAtlas Personal Microarray System. .. Raw data were gas chromatography-robust multiarray averaging normalized and log2 transformed, and statistics were performed using the Partek Genomic Suite (Partek, St. Louis, MO).

    Article Title: Targeted suppression of EVI1 oncogene expression by sequence-specific pyrrole-imidazole polyamide.
    Article Snippet: Total RNA was prepared and the integrity of the RNA was checked using the Agilent 1378 Chemistry & Biology 21, 1370–1380, October 23, 2014 a2014 E 2100 Bioanalyzer (Agilent Technologies). .. One hundred nanograms of total RNA quantified by Nanodrop ND1000 v. 3.5.2 (Thermo Scientific) was labeled using aGeneChipWTPLUSReagent kit (Affymetrix) and was hybridized to Human Gene 2.1 ST Array Strip (Affymetrix) for 20 ± 1 hr at 48 C. The hybridized arrays were washed, stained, and imaged on a GeneAtlas Personal Microarray System (Affymetrix). .. The hybridized probe set values were normalized using Affymetrix gene expression console software and analyzed for gene expression using theMultiExperiment Viewer (MeV) microarray data analysis platform (http://www.tm4.org/mev.html).

    Article Title: Co-option of the PRDM14-CBFA2T complex from motor neurons to pluripotent cells during vertebrate evolution.
    Article Snippet: The labelled single-strand cDNA was hybridized to the GeneChiPTM Mouse Gene 2.1 ST Array Strip (Thermo Fisher Scientific). .. The signal intensities of microarray probes were scanned and quantitated using the GeneAtlas Personal Microarray System (Thermo Fisher Scientific). .. CELL files of Gene ChIP data were normalized using the Robust Multi-array Average program with the default settings in the Affymetrix Expression ConsoleTM.

    Article Title: The signal transducers Stat1 and Stat3 and their novel target Jmjd3 drive the expression of inflammatory genes in microglia
    Article Snippet: .. The whole-genome amplification procedure was performed with a GeneAtlas WT Expression Kit according to the manufacturer’s User Guide for the GeneAtlas Personal Microarray System (Affymetrix, Santa Clara, CA, USA). .. Fragmented and labeled cDNA was hybridized to the Affymetrix Mouse Gene 1.1 ST Array Strip (770,317 probes including 28,853 mouse genes).

    Expressing:

    Article Title: Endogenous intrahepatic IFNs and association with IFN-free HCV treatment outcome
    Article Snippet: Total RNA was extracted with the TissueRuptor and RNeasy kit (Qiagen), with an on-column elimination of residual DNA by DNAseI digestion (Qiagen). .. Microarray expression analysis was performed using 50–100 ng total RNA that was amplified, biotinylated, and hybridized to the Affymetrix Human Genome U-219 array, composed of over 530,000 probes representing more than 36,000 transcripts, using a GeneAtlas Personal Microarray System (Affymetrix). ..

    Article Title: Liver X receptor-α activation enhances cholesterol secretion in lactating mammary epithelium
    Article Snippet: .. Briefly, 250 ng of total RNA were used as input to the Whole-Transcript Expression RNA kit (Life Technologies, Carlsbad, CA), samples were hybridized to mouse 1.1 ST Gene Arrays (Affymetrix, Santa Clara, CA), and arrays were washed, stained, and imaged using the Affymetrix GeneAtlas Personal Microarray System. .. Raw data were gas chromatography-robust multiarray averaging normalized and log2 transformed, and statistics were performed using the Partek Genomic Suite (Partek, St. Louis, MO).

    Article Title: The signal transducers Stat1 and Stat3 and their novel target Jmjd3 drive the expression of inflammatory genes in microglia
    Article Snippet: .. The whole-genome amplification procedure was performed with a GeneAtlas WT Expression Kit according to the manufacturer’s User Guide for the GeneAtlas Personal Microarray System (Affymetrix, Santa Clara, CA, USA). .. Fragmented and labeled cDNA was hybridized to the Affymetrix Mouse Gene 1.1 ST Array Strip (770,317 probes including 28,853 mouse genes).

    Amplification:

    Article Title: Endogenous intrahepatic IFNs and association with IFN-free HCV treatment outcome
    Article Snippet: Total RNA was extracted with the TissueRuptor and RNeasy kit (Qiagen), with an on-column elimination of residual DNA by DNAseI digestion (Qiagen). .. Microarray expression analysis was performed using 50–100 ng total RNA that was amplified, biotinylated, and hybridized to the Affymetrix Human Genome U-219 array, composed of over 530,000 probes representing more than 36,000 transcripts, using a GeneAtlas Personal Microarray System (Affymetrix). ..

    Staining:

    Article Title: Liver X receptor-α activation enhances cholesterol secretion in lactating mammary epithelium
    Article Snippet: .. Briefly, 250 ng of total RNA were used as input to the Whole-Transcript Expression RNA kit (Life Technologies, Carlsbad, CA), samples were hybridized to mouse 1.1 ST Gene Arrays (Affymetrix, Santa Clara, CA), and arrays were washed, stained, and imaged using the Affymetrix GeneAtlas Personal Microarray System. .. Raw data were gas chromatography-robust multiarray averaging normalized and log2 transformed, and statistics were performed using the Partek Genomic Suite (Partek, St. Louis, MO).

    Article Title: Targeted suppression of EVI1 oncogene expression by sequence-specific pyrrole-imidazole polyamide.
    Article Snippet: Total RNA was prepared and the integrity of the RNA was checked using the Agilent 1378 Chemistry & Biology 21, 1370–1380, October 23, 2014 a2014 E 2100 Bioanalyzer (Agilent Technologies). .. One hundred nanograms of total RNA quantified by Nanodrop ND1000 v. 3.5.2 (Thermo Scientific) was labeled using aGeneChipWTPLUSReagent kit (Affymetrix) and was hybridized to Human Gene 2.1 ST Array Strip (Affymetrix) for 20 ± 1 hr at 48 C. The hybridized arrays were washed, stained, and imaged on a GeneAtlas Personal Microarray System (Affymetrix). .. The hybridized probe set values were normalized using Affymetrix gene expression console software and analyzed for gene expression using theMultiExperiment Viewer (MeV) microarray data analysis platform (http://www.tm4.org/mev.html).

    Labeling:

    Article Title: Targeted suppression of EVI1 oncogene expression by sequence-specific pyrrole-imidazole polyamide.
    Article Snippet: Total RNA was prepared and the integrity of the RNA was checked using the Agilent 1378 Chemistry & Biology 21, 1370–1380, October 23, 2014 a2014 E 2100 Bioanalyzer (Agilent Technologies). .. One hundred nanograms of total RNA quantified by Nanodrop ND1000 v. 3.5.2 (Thermo Scientific) was labeled using aGeneChipWTPLUSReagent kit (Affymetrix) and was hybridized to Human Gene 2.1 ST Array Strip (Affymetrix) for 20 ± 1 hr at 48 C. The hybridized arrays were washed, stained, and imaged on a GeneAtlas Personal Microarray System (Affymetrix). .. The hybridized probe set values were normalized using Affymetrix gene expression console software and analyzed for gene expression using theMultiExperiment Viewer (MeV) microarray data analysis platform (http://www.tm4.org/mev.html).

    Stripping Membranes:

    Article Title: Targeted suppression of EVI1 oncogene expression by sequence-specific pyrrole-imidazole polyamide.
    Article Snippet: Total RNA was prepared and the integrity of the RNA was checked using the Agilent 1378 Chemistry & Biology 21, 1370–1380, October 23, 2014 a2014 E 2100 Bioanalyzer (Agilent Technologies). .. One hundred nanograms of total RNA quantified by Nanodrop ND1000 v. 3.5.2 (Thermo Scientific) was labeled using aGeneChipWTPLUSReagent kit (Affymetrix) and was hybridized to Human Gene 2.1 ST Array Strip (Affymetrix) for 20 ± 1 hr at 48 C. The hybridized arrays were washed, stained, and imaged on a GeneAtlas Personal Microarray System (Affymetrix). .. The hybridized probe set values were normalized using Affymetrix gene expression console software and analyzed for gene expression using theMultiExperiment Viewer (MeV) microarray data analysis platform (http://www.tm4.org/mev.html).

    Whole Genome Amplification:

    Article Title: The signal transducers Stat1 and Stat3 and their novel target Jmjd3 drive the expression of inflammatory genes in microglia
    Article Snippet: .. The whole-genome amplification procedure was performed with a GeneAtlas WT Expression Kit according to the manufacturer’s User Guide for the GeneAtlas Personal Microarray System (Affymetrix, Santa Clara, CA, USA). .. Fragmented and labeled cDNA was hybridized to the Affymetrix Mouse Gene 1.1 ST Array Strip (770,317 probes including 28,853 mouse genes).



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    Bar graph showing the correlation of <t>microarray</t> data with quantitative real-time reverse transcription polymerase chain reaction (Q-RT-PCR) transcript levels. The X axis shows a selected panel of miRNAs and mRNAs primarily related to epithelial-mesenchymal transition, tissue fibrosis, and angiogenesis. The Y-axis features black and grey bars which represent the fold change by microarray and Q-RT-PCR experiment, respectively.
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    Image Search Results


    Bar graph showing the correlation of microarray data with quantitative real-time reverse transcription polymerase chain reaction (Q-RT-PCR) transcript levels. The X axis shows a selected panel of miRNAs and mRNAs primarily related to epithelial-mesenchymal transition, tissue fibrosis, and angiogenesis. The Y-axis features black and grey bars which represent the fold change by microarray and Q-RT-PCR experiment, respectively.

    Journal: Experimental eye research

    Article Title: miRNA and mRNA expression profiling identifies members of the miR-200 family as potential regulators of epithelial-mesenchymal transition in pterygium

    doi: 10.1016/j.exer.2013.07.003

    Figure Lengend Snippet: Bar graph showing the correlation of microarray data with quantitative real-time reverse transcription polymerase chain reaction (Q-RT-PCR) transcript levels. The X axis shows a selected panel of miRNAs and mRNAs primarily related to epithelial-mesenchymal transition, tissue fibrosis, and angiogenesis. The Y-axis features black and grey bars which represent the fold change by microarray and Q-RT-PCR experiment, respectively.

    Article Snippet: The arrays were hybridized, washed, stained and scanned using the GeneAtlas™ Personal Microarray System (Affymetrix).

    Techniques: Microarray, Reverse Transcription Polymerase Chain Reaction